data homogenization processing summary and QC check results

files processed:

type filename
provided data Copy of hf007-02-litterfallJM.csv
provided data Copy of hf007-07-root-mass.csv
provided data Copy of hf007-08-soil-prop-1990.csv
provided data Copy of hf007-09-soil-prop-1991.csv
provided data Copy of hf007-10-soil-prop-1995.csv
provided data Copy of hf007-11-soil-prop-2000.csv
homogenized data Copy of hf007-02-litterfallJM_HMGZD
homogenized data Copy of hf007-07-root-mass_HMGZD
homogenized data Copy of hf007-08-soil-prop-1990_HMGZD
homogenized data Copy of hf007-09-soil-prop-1991_HMGZD
homogenized data Copy of hf007-10-soil-prop-1995_HMGZD
homogenized data Copy of hf007-11-soil-prop-2000_HMGZD

summary of row counts from submitted and homogenized data:

data_entity num_rows_data num_rows_homogenized
Copy of hf007-02-litterfallJM.csv 21 21
Copy of hf007-11-soil-prop-2000.csv 117 117
Copy of hf007-10-soil-prop-1995.csv 99 99
Copy of hf007-09-soil-prop-1991.csv 63 63
Copy of hf007-07-root-mass.csv 21 21
Copy of hf007-08-soil-prop-1990.csv 19 19

confirm all location-level variables entered into the key file were included in the homogenized data

data_source data_check
Copy of hf007-11-soil-prop-2000_HMGZD all provided location variables included
Copy of hf007-10-soil-prop-1995_HMGZD all provided location variables included
Copy of hf007-09-soil-prop-1991_HMGZD all provided location variables included
Copy of hf007-08-soil-prop-1990_HMGZD all provided location variables included
Copy of hf007-07-root-mass_HMGZD all provided location variables included
Copy of hf007-02-litterfallJM_HMGZD all provided location variables included

confirm all profile-level variables entered into the key file were included in the homogenized data

profile data variables expected: 25
profile data variables homogenized: 54

data_source providedName homogenizedName exampleValue
Copy of hf007-11-soil-prop-2000_HMGZD plot L2 21
Copy of hf007-11-soil-prop-2000_HMGZD rep L3 C
Copy of hf007-11-soil-prop-2000_HMGZD treatment tx_L1 TOX
Copy of hf007-11-soil-prop-2000_HMGZD date observation_date_1 11109
Copy of hf007-11-soil-prop-2000_HMGZD avg.per.c soc 46.08
Copy of hf007-11-soil-prop-2000_HMGZD avg.per.n n_tot 2.1
Copy of hf007-11-soil-prop-2000_HMGZD depth top layer_top 0
Copy of hf007-11-soil-prop-2000_HMGZD depth bottom layer_bot 10
Copy of hf007-10-soil-prop-1995_HMGZD plot L2 21
Copy of hf007-10-soil-prop-1995_HMGZD rep L3 C
Copy of hf007-10-soil-prop-1995_HMGZD treatment tx_L1 TOX
Copy of hf007-10-soil-prop-1995_HMGZD date observation_date_1 9131
Copy of hf007-10-soil-prop-1995_HMGZD avg.per.c soc 0.45
Copy of hf007-10-soil-prop-1995_HMGZD soil.c soc_stock 7719
Copy of hf007-10-soil-prop-1995_HMGZD avg.per.n n_tot 0.02
Copy of hf007-10-soil-prop-1995_HMGZD c.n c_to_n 29.29
Copy of hf007-10-soil-prop-1995_HMGZD depth top layer_top 0
Copy of hf007-10-soil-prop-1995_HMGZD depth bottom layer_bot 10
Copy of hf007-10-soil-prop-1995_HMGZD db.0to10 bd_samp 1.49
Copy of hf007-10-soil-prop-1995_HMGZD ph ph_h2o 4.57
Copy of hf007-10-soil-prop-1995_HMGZD exch.ca ca 11.4
Copy of hf007-10-soil-prop-1995_HMGZD exch.mg mg 3.13
Copy of hf007-10-soil-prop-1995_HMGZD exch.k k 2.03
Copy of hf007-10-soil-prop-1995_HMGZD exch.na na 0.35
Copy of hf007-10-soil-prop-1995_HMGZD exch.al al 14.88
Copy of hf007-10-soil-prop-1995_HMGZD exch.bases base_sum 15.16
Copy of hf007-10-soil-prop-1995_HMGZD cec cec_sum 18.58
Copy of hf007-10-soil-prop-1995_HMGZD base.sat bs 1.21
Copy of hf007-09-soil-prop-1991_HMGZD plot L2 21
Copy of hf007-09-soil-prop-1991_HMGZD rep L3 -Inf
Copy of hf007-09-soil-prop-1991_HMGZD treatment tx_L1 TOX
Copy of hf007-09-soil-prop-1991_HMGZD date observation_date_1 7974
Copy of hf007-09-soil-prop-1991_HMGZD avg.per.c soc 47.2
Copy of hf007-09-soil-prop-1991_HMGZD avg.per.n n_tot 2.12
Copy of hf007-09-soil-prop-1991_HMGZD avg.d.13c 15n -25.3
Copy of hf007-09-soil-prop-1991_HMGZD avg.d.15n 13c 6.9
Copy of hf007-09-soil-prop-1991_HMGZD depth top layer_top 10
Copy of hf007-09-soil-prop-1991_HMGZD depth bottom layer_bot 15
Copy of hf007-09-soil-prop-1991_HMGZD ph ph_h2o 4.47
Copy of hf007-08-soil-prop-1990_HMGZD plot L2 21
Copy of hf007-08-soil-prop-1990_HMGZD date observation_date_1 7578
Copy of hf007-08-soil-prop-1990_HMGZD avg.per.c soc 48.24
Copy of hf007-08-soil-prop-1990_HMGZD avg.per.n n_tot 2.07
Copy of hf007-08-soil-prop-1990_HMGZD depth top layer_top 0
Copy of hf007-08-soil-prop-1990_HMGZD depth bottom layer_bot 15
Copy of hf007-07-root-mass_HMGZD block L1 3
Copy of hf007-07-root-mass_HMGZD plot L2 21
Copy of hf007-07-root-mass_HMGZD treatment tx_L1 O/A-less
Copy of hf007-07-root-mass_HMGZD fine10.avg bgb 1489
Copy of hf007-02-litterfallJM_HMGZD block L1 3
Copy of hf007-02-litterfallJM_HMGZD plot L2 21
Copy of hf007-02-litterfallJM_HMGZD treatment tx_L1 O/A-less
Copy of hf007-02-litterfallJM_HMGZD date observation_date_1 12015
Copy of hf007-02-litterfallJM_HMGZD abv litter 2002 litterfall_anpp 7118

summary plotting

## $`Copy of hf007-11-soil-prop-2000_HMGZD`
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## $`Copy of hf007-08-soil-prop-1990_HMGZD`
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## $`Copy of hf007-07-root-mass_HMGZD`
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## $`Copy of hf007-02-litterfallJM_HMGZD`
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## $`Copy of hf007-02-litterfallJM_HMGZD`[[2]]